I am having the same problem. Turbo tax won't let it efile until a county is selected. The Maryland form specifically says if you live in Baltimore City to leave it blank!
I am using the downloaded deluxe and it has updated.
As you walk through the preparation of your Maryland return, when you get to the screen Tell Us Your Maryland Information, you should choose BALTIMORE CITY for the County or Area. Please see screenshot below for reference. @rmtsc
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I am sure my version did not have the Baltimore City option. My version was recently checked for updates. I ended up clicking the Baltimore County and think I did that in a previous year. Not ideal.