Solved
"I'm a MD resident and worked in MD Jan 2016. I was transferred to KS in Feb 2016 and stayed there until July 2016. I then moved to TX and became a resident. I have a W2 from MD (they took tax out) and another W2 from KS (state tax also taken out). I know I need to file with MD.....do I need to file with KS or can I somehow indicate to MD the amount of tax that KS took out. Also, the Box #1 on each W2 (MD and KS) differ by about 1%"
Since you worked in KS, you will file with KS as well as MD for 2016. (TX has no state income tax so you don't file there.)
*IF* you were still a MD resident while working in KS, you should be able to claim a credit on your MD return for your net income tax paid (NOT withheld) to KS; but you will still have to file a KS return first. Your KS withholding will be applied to your KS tax return.
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